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  5. AMTR_s00071p00128800

AMTR_s00071p00128800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.109

Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00128800
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00131920 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00133840 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Adi_g048053 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g18685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016978001 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Gb_33797 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
LOC_Os01g09430.1 LOC_Os01g09430 Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Lfl_g26674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_200035g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_220550g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_7041743g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_938243g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Msp_g07199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo425605 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Solyc03g121040.4.1 Solyc03g121040 Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Zm00001e016597_P001 Zm00001e016597 Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 56 134
No external refs found!