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  5. AMTR_s00069p00156070

AMTR_s00069p00156070 (ZFWD1,...)


Aliases : ZFWD1, evm_27.TU.AmTr_v1.0_scaffold00069.126

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00156070

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0312.g064202 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Gb_34826 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 349 380
IPR001680 WD40_repeat 259 293
IPR001680 WD40_repeat 137 172
IPR001680 WD40_repeat 298 332
IPR000571 Znf_CCCH 107 127
No external refs found!