AMTR_s00069p00149060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.116

No description available


Gene families : OG0007249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007249_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00149060
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT5G62140 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Ala_g03657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08737 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g09287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G021000.1 Ceric.12G021000 not classified & original description: pacid=50600776... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.53 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g00677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010637001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_11488 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g45460.1 LOC_Os02g45460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g28021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g17680.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g00435 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!