Sequence Description Alias PCC hrr AMTR_s00015p00257490 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein TROL, evm_27.TU.AmTr_v1.0_scaffold00015.112 0.9125293142197707 18 AMTR_s00011p00266100 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGB, SIG2, SIGA, SIG1, RPOD1, evm_27.TU.AmTr_v1.0_scaffold00011.228 0.9098485380371157 44 AMTR_s00059p00208110 Photosynthesis.photophosphorylation.cytochrome b6/f complex.component PetM/VII evm_27.TU.AmTr_v1.0_scaffold00059.240 0.9027527131624614 7 AMTR_s00004p00145140 evm_27.TU.AmTr_v1.0_scaffold00004.142 0.9014604088394327 35 AMTR_s00052p00157970 evm_27.TU.AmTr_v1.0_scaffold00052.66 0.9000689999073768 41 AMTR_s00048p00222810 evm_27.TU.AmTr_v1.0_scaffold00048.208 0.8992704851671303 20 AMTR_s00016p00074040 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component CCB1, evm_27.TU.AmTr_v1.0_scaffold00016.38 0.8988493253193051 35 AMTR_s00024p00252900 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor evm_27.TU.AmTr_v1.0_scaffold00024.352 0.8987616952980559 23 AMTR_s00107p00035950 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component evm_27.TU.AmTr_v1.0_scaffold00107.14 0.8943218497202244 52 AMTR_s00101p00041820 evm_27.TU.AmTr_v1.0_scaffold00101.13 0.8941312915551294 39 AMTR_s00024p00130820 evm_27.TU.AmTr_v1.0_scaffold00024.77 0.8937889912235658 49 AMTR_s00046p00014960 Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.2 0.8936436369473897 50 AMTR_s00092p00162140 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbR PSBR, evm_27.TU.AmTr_v1.0_scaffold00092.138 0.8913245002224189 13 AMTR_s00024p00220830 evm_27.TU.AmTr_v1.0_scaffold00024.217 0.8900872600653581 25 AMTR_s00009p00072720 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGF, SIG6, SOLDAT8, ATSIG6, evm_27.TU.AmTr_v1.0_scaffold00009.21 0.8881551627962642 99 AMTR_s00140p00103640 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL9 component RPL9, evm_27.TU.AmTr_v1.0_scaffold00140.50 0.8862485174340493 16 AMTR_s00011p00231930 Pheophytinase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.113 0.8855356134187887 25 AMTR_s00130p00051210 evm_27.TU.AmTr_v1.0_scaffold00130.20 0.8830234279226898 53 AMTR_s00203p00014010 Disease resistance protein RFL1 OS=Arabidopsis thaliana RFL1, evm_27.TU.AmTr_v1.0_scaffold00203.3 0.8820863089918687 38 AMTR_s00012p00252270 evm_27.TU.AmTr_v1.0_scaffold00012.259 0.8817135457668089 24 AMTR_s00036p00206170 evm_27.TU.AmTr_v1.0_scaffold00036.123 0.8812917028273414 84 AMTR_s00092p00157010 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.132 0.879652503711699 67 AMTR_s00002p00197820 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.183 0.8770725329219058 77 AMTR_s00010p00265920 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB4/NDF6 component NDF6, evm_27.TU.AmTr_v1.0_scaffold00010.515 0.8770293261401447 68 AMTR_s00031p00080280 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.31 0.8755836946897395 47 AMTR_s00137p00042790 Protein biosynthesis.organelle translation machineries.translation initiation.IF-3 initiation factor evm_27.TU.AmTr_v1.0_scaffold00137.14 0.8747491099626593 94 AMTR_s00012p00251230 evm_27.TU.AmTr_v1.0_scaffold00012.252 0.8745683923793727 31 AMTR_s00143p00086620 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00143.21 0.8740930775090594 32 AMTR_s00008p00118590 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.50 0.8732406768979303 77 AMTR_s00099p00089660 evm_27.TU.AmTr_v1.0_scaffold00099.67 0.8726810268664631 100 AMTR_s00029p00095840 Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.88 0.8722749702967029 46 AMTR_s00019p00236430 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.NFU1/2/3 component ATCNFU3, NFU3, evm_27.TU.AmTr_v1.0_scaffold00019.332 0.8717408465389782 87 AMTR_s00061p00169610 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00061.177 0.8714117348156142 71 AMTR_s00070p00197870 Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (AKT/SKOR/GORK-type) AKT3, AKT2/3, AKT2, KT2/3, evm_27.TU.AmTr_v1.0_scaffold00070.132 0.870008537231935 39 AMTR_s00059p00183340 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.HCF164 thioredoxin-like factor HCF164, evm_27.TU.AmTr_v1.0_scaffold00059.198 0.8684660863246529 84 AMTR_s00012p00252840 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP1 protein evm_27.TU.AmTr_v1.0_scaffold00012.263 0.8675680156078568 67 AMTR_s00062p00065360 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LCNP NPQ-regulator lipocalin CHL, evm_27.TU.AmTr_v1.0_scaffold00062.38 0.8638771615820787 59 AMTR_s00056p00191070 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00056.177 0.8624810062995926 46 AMTR_s00092p00149880 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.118 0.8586580169532736 100 AMTR_s00065p00020910 Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.6 0.8586052377967318 57 AMTR_s00013p00039290 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL27 component RPL27, evm_27.TU.AmTr_v1.0_scaffold00013.7 0.8583119268965432 78 AMTR_s00071p00074520 PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.45 0.8572734359728338 96 AMTR_s00142p00033030 MAR-binding filament-like protein 1-1 OS=Nicotiana tabacum MFP1, evm_27.TU.AmTr_v1.0_scaffold00142.14 0.8572588341882794 55 AMTR_s00010p00259680 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP8, DEG8, evm_27.TU.AmTr_v1.0_scaffold00010.427 0.8553873575077087 72 AMTR_s00007p00259840 evm_27.TU.AmTr_v1.0_scaffold00007.320 0.8533009053056694 63 AMTR_s00022p00112770 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component evm_27.TU.AmTr_v1.0_scaffold00022.100 0.8486244701781441 99 AMTR_s00003p00193130 evm_27.TU.AmTr_v1.0_scaffold00003.172 0.8440892694835639 76 AMTR_s00149p00064300 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase BGLU12, evm_27.TU.AmTr_v1.0_scaffold00149.41 0.8409617298089168 85 AMTR_s00045p00119660 evm_27.TU.AmTr_v1.0_scaffold00045.117 0.8384895344374601 90 AMTR_s00026p00192590 evm_27.TU.AmTr_v1.0_scaffold00026.97 0.8326217255204995 97