Aliases : PFC1, evm_27.TU.AmTr_v1.0_scaffold00069.101
Description : RNA processing.RNA modification.rRNA/tRNA methylation.PFC-type rRNA adenosine dimethylase
Gene families : OG0006692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006692_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00069p00137360 | |
Cluster | HCCA: Cluster_32 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.30G050300.1 | PFC1, Ceric.30G050300 | rRNA adenosine dimethylase *(PFC) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25709 | PFC1 | rRNA adenosine dimethylase *(PFC) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22744 | PFC1 | rRNA adenosine dimethylase *(PFC) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEA | Interproscan |
MF | GO:0000179 | rRNA (adenine-N6,N6-)-dimethyltransferase activity | IEA | Interproscan |
MF | GO:0008649 | rRNA methyltransferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
MF | GO:0005254 | chloride channel activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
BP | GO:0006821 | chloride transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | HCCA |
MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
MF | GO:0022836 | gated channel activity | IEP | HCCA |
MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001737 | KsgA/Erm | 91 | 340 |
No external refs found! |