Aliases : SLK2, evm_27.TU.AmTr_v1.0_scaffold00069.80
Description : Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana
Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G25515 | SLK3 | SEUSS-like 3 | 0.04 | OrthoFinder output from all 47 species | |
Aop_g21250 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0022.g016031 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.33G002300.1 | SEU, Ceric.33G002300 | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g43879 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g23719 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01010616001 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_04218 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Gb_04695 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Gb_27183 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g03600.1 | SLK2, LOC_Os06g03600 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g10060.1 | SEU, LOC_Os11g10060 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g10070.1 | SEU, LOC_Os11g10070 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05019 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
MA_13825g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_208023g0010 | SLK2 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g03852 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g15709 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g24769 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25017 | No alias | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g29533 | No alias | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g059750.3.1 | SEU, Solyc06g059750 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g059760.3.1 | SEU, Solyc06g059760 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011073_P001 | SEU, Zm00001e011073 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039584_P001 | SEU, Zm00001e039584 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |