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  5. AMTR_s00069p00095150

AMTR_s00069p00095150 (RPL24A,...)


Aliases : RPL24A, evm_27.TU.AmTr_v1.0_scaffold00069.59

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL24 component


Gene families : OG0002539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00095150
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT2G36620 RPL24A ribosomal protein L24 0.26 OrthoFinder output from all 47 species
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.29 OrthoFinder output from all 47 species
Adi_g016157 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Adi_g039871 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Aev_g10153 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aev_g26136 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g09594 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g20428 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Ala_g22691 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g23672 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g25230 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g44809 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g00606 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g07149 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Aop_g09913 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g22551 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21349.t1 RPL24A, Aspi01Gene21349 component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0081.g038645 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.2 OrthoFinder output from all 47 species
Cba_g10268 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g26139 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.24G022200.1 RPL24A, Ceric.24G022200 component *(eL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ceric.27G010000.1 STV1, RPL24,... component *(eL24) of large ribosomal-subunit (LSU)... 0.18 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001093.9 STV1, RPL24, RPL24B No description available 0.17 OrthoFinder output from all 47 species
Cre09.g391097 STV1, RPL24, RPL24B Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 OrthoFinder output from all 47 species
Dac_g13575 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.19 OrthoFinder output from all 47 species
Dac_g29270 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Dcu_g14497 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g45784 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Dde_g12301 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ehy_g21948 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
GSVIVT01010601001 RPL24A Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 OrthoFinder output from all 47 species
GSVIVT01033743001 STV1, RPL24, RPL24B Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder output from all 47 species
GSVIVT01034676001 RPL24A Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Gb_07396 STV1, RPL24, RPL24B pri-miRNA recruitment factor (STV1). component RPL24 of... 0.08 OrthoFinder output from all 47 species
LOC_Os01g59990.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.18 OrthoFinder output from all 47 species
LOC_Os07g12250.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.18 OrthoFinder output from all 47 species
Lfl_g00331 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g26179 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
MA_13787g0010 RPL24A no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_14639g0010 STV1, RPL24, RPL24B pri-miRNA recruitment factor (STV1). component RPL24 of... 0.04 OrthoFinder output from all 47 species
Mp5g17510.1 RPL24A pri-miRNA recruitment factor (STV1). component RPL24 of... 0.23 OrthoFinder output from all 47 species
Msp_g04603 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Nbi_g00286 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g10553 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c13_10770V3.1 RPL24A, Pp3c13_10770 ribosomal protein L24 0.13 OrthoFinder output from all 47 species
Pp3c3_8930V3.1 RPL24A, Pp3c3_8930 Ribosomal protein L24e family protein 0.07 OrthoFinder output from all 47 species
Pp3c4_25160V3.1 RPL24A, Pp3c4_25160 ribosomal protein L24 0.08 OrthoFinder output from all 47 species
Ppi_g06076 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g18242 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004929 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012356 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g04326 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.2 OrthoFinder output from all 47 species
Sam_g06345 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g06964 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Solyc09g008800.3.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.21 OrthoFinder output from all 47 species
Solyc10g083740.3.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.15 OrthoFinder output from all 47 species
Solyc10g085480.2.1 RPL24A, Solyc10g085480 pri-miRNA recruitment factor (STV1). component RPL24 of... 0.1 OrthoFinder output from all 47 species
Spa_g03066 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Spa_g08054 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g31362 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g23099 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.17 OrthoFinder output from all 47 species
Zm00001e004947_P001 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.29 OrthoFinder output from all 47 species
Zm00001e012463_P004 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.27 OrthoFinder output from all 47 species
Zm00001e027315_P001 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 25 94
No external refs found!