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Aliases : PDF1, evm_27.TU.AmTr_v1.0_scaffold00068.109
Description : Protodermal factor 1 OS=Arabidopsis thaliana
Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00068p00158450 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00030870 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00858p00001360 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42840 | PDF1 | protodermal factor 1 | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g007335 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g010045 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g050187 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116822 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116823 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g00397 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09555 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12595 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g24247 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g08765 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05496 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18021 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28876.t1 | Aspi01Gene28876 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene41347.t1 | Aspi01Gene41347 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene56111.t1 | Aspi01Gene56111 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69388.t1 | Aspi01Gene69388 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene71674.t1 | Aspi01Gene71674 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013184 | No alias | not classified & original description: CDS=1-771 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0387.g067590 | No alias | regulatory protein *(MOS11) of helicase activity &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g16161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G029600.1 | Ceric.09G029600 | not classified & original description: pacid=50588127... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G029800.1 | Ceric.09G029800 | not classified & original description: pacid=50586822... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G030000.1 | Ceric.09G030000 | not classified & original description: pacid=50587904... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G030200.1 | Ceric.09G030200 | not classified & original description: pacid=50586656... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.13G022300.1 | Ceric.13G022300 | not classified & original description: pacid=50635736... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G044400.1 | Ceric.14G044400 | not classified & original description: pacid=50634347... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G043800.1 | Ceric.22G043800 | not classified & original description: pacid=50614893... | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g07202 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07203 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02335 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g35615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16848 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28301 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46939 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00550 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08732 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g09543 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g09544 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13225 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13226 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13227 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13694 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13695 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13696 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g15103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15104 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18161 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g18994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40194 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g10490.1 | LOC_Os01g10490 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g52690.1 | PDF1, LOC_Os01g52690 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g13660.1 | LOC_Os02g13660 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g43670.1 | LOC_Os04g43670 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g35970.1 | LOC_Os06g35970 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g14938 | PDF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g55644 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24985 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_111671g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g10620.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g22090.1 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g11806 | PDF1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g11807 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27633 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g29044 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g38186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23508 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26532 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26533 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g39776 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g23849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11102 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57949 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g59815 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g60945 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010928 | No alias | not classified & original description: CDS=1-1425 | 0.05 | OrthoFinder output from all 47 species | |
| Smo437656 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g083880.2.1 | Solyc06g083880 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g055950.3.1 | PDF1, Solyc07g055950 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc12g011010.2.1 | PDF1, Solyc12g011010 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51721 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g18388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014410_P001 | PDF1, Zm00001e014410 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016528_P003 | Zm00001e016528 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019923_P004 | PDF1, Zm00001e019923 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030674_P001 | Zm00001e030674 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| MF | GO:0042802 | identical protein binding | IEP | HCCA |
| BP | GO:0043086 | negative regulation of catalytic activity | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044092 | negative regulation of molecular function | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |