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  5. AMTR_s00067p00139470

AMTR_s00067p00139470 (AtPP2-B1, PP2-B1,...)


Aliases : AtPP2-B1, PP2-B1, evm_27.TU.AmTr_v1.0_scaffold00067.127

Description : F-box protein At2g02240 OS=Arabidopsis thaliana


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00139470
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Als_g15955 AtPP2-B8, PP2-B8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064524 No alias not classified & original description: CDS=1-477 0.02 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.02 OrthoFinder output from all 47 species
Cba_g09826 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14188 AtPP2-B7, PP2-B7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21011 ATPP2-B11, PP2-B11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019353001 ATPP2-A4, PP2-A4 Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027514001 AtPP2-A13, PP2-A13 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g56820.1 MEE66, LOC_Os02g56820 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02550.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10437012g0010 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_7604366g0010 AtPP2-B6, PP2-B6 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025886 PP2-like 21 196
No external refs found!