Heatmap: Cluster_80 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00151920 (evm_27.TU.AmTr_v1.0_scaffold00001.136)
0.31 0.31 0.84 1.09 2.49 -5.67 -2.25 -6.67 -2.31 -1.97 -0.86 -0.81 -0.03 -0.14 1.29 -1.81 -1.38 -2.05 -0.97 0.0 -1.9 0.19
AMTR_s00002p00227760 (evm_27.TU.AmTr_v1.0_scaffold00002.255)
1.14 1.43 -0.27 0.61 1.9 0.42 -2.77 -1.6 -2.67 -2.52 0.06 0.24 0.7 0.04 0.13 -2.61 -2.2 0.01 -1.21 -1.48 -2.0 -1.12
AMTR_s00003p00266840 (evm_27.TU.AmTr_v1.0_scaffold00003.381)
- - - 2.2 3.54 - -2.07 -2.7 -1.1 -1.56 - 0.45 -1.71 -2.57 1.25 - - - - -3.93 - -1.65
AMTR_s00009p00186290 (evm_27.TU.AmTr_v1.0_scaffold00009.117)
-0.02 0.64 -0.78 -0.12 1.21 0.21 0.58 -1.51 -0.39 -0.47 0.25 0.06 0.13 -0.09 -0.22 -0.85 0.14 0.17 -0.24 -0.22 -1.02 0.06
AMTR_s00010p00069750 (evm_27.TU.AmTr_v1.0_scaffold00010.38)
0.78 -0.4 0.87 1.2 1.97 - -1.98 -1.62 -1.54 -1.64 -0.15 0.31 0.11 -0.04 0.73 -1.92 0.52 -0.16 -1.24 -1.85 -2.17 -0.22
AMTR_s00011p00239880 (evm_27.TU.AmTr_v1.0_scaffold00011.134)
-3.39 - -1.32 -0.88 2.9 -7.04 -5.92 -6.85 -6.18 -6.18 -0.22 -0.78 0.05 0.71 1.64 0.61 -1.24 -0.57 -1.22 -0.68 -1.33 1.09
AMTR_s00013p00100640 (evm_27.TU.AmTr_v1.0_scaffold00013.52)
-0.28 -1.01 -1.21 0.74 2.13 -4.75 -0.63 -1.43 -0.0 -0.02 -0.57 -0.43 0.55 0.92 1.66 -4.13 -1.03 -1.28 -0.65 -0.8 -2.69 -0.13
AMTR_s00016p00254890 (evm_27.TU.AmTr_v1.0_scaffold00016.330)
- 2.02 - 1.29 2.46 - - - -5.09 -5.7 -1.18 -0.57 -1.4 -2.12 0.83 -3.14 0.04 -0.18 -1.79 -2.87 -2.92 1.95
AMTR_s00016p00256020 (evm_27.TU.AmTr_v1.0_scaffold00016.339)
-0.01 0.22 0.4 0.26 1.5 0.38 -1.24 -1.6 -2.2 -2.49 0.61 0.23 0.1 0.4 -0.56 0.37 -0.58 0.23 0.08 -0.54 -0.08 -1.12
AMTR_s00019p00248000 (evm_27.TU.AmTr_v1.0_scaffold00019.396)
0.45 1.41 0.28 1.28 1.93 -2.6 -2.19 -0.91 -1.84 -1.81 0.15 -0.74 0.13 0.07 -0.29 0.32 -1.14 -1.41 -0.91 -1.29 -1.23 -0.13
AMTR_s00024p00189140 (evm_27.TU.AmTr_v1.0_scaffold00024.153)
-0.77 -0.69 -1.08 1.81 2.09 -6.99 -9.92 -7.34 -10.27 -9.17 0.01 -0.98 1.01 -1.2 0.65 0.95 -1.36 -0.02 -0.33 -1.59 -0.42 0.87
0.68 0.99 0.64 -0.71 1.31 0.47 -0.23 -0.74 -1.07 -0.99 -0.28 -0.1 0.42 -0.08 -0.31 -0.2 -0.98 -0.79 -0.72 -0.09 -1.32 0.25
AMTR_s00025p00145710 (evm_27.TU.AmTr_v1.0_scaffold00025.160)
- - - 2.35 2.53 - -2.21 - -1.83 -3.34 -0.5 - -0.98 -1.53 -0.2 - - - -1.09 -2.34 2.5 0.81
-0.34 1.69 1.54 0.34 1.96 - -3.79 0.28 -1.65 -1.81 -2.14 -2.49 0.4 -0.19 0.29 -1.64 -1.25 -1.68 -1.06 0.15 -0.72 -0.05
-0.35 0.01 -0.44 1.61 0.99 -4.4 -1.39 -0.79 -0.32 -0.55 0.35 0.42 0.24 -0.09 0.67 -0.45 0.16 0.1 0.14 -0.81 -2.11 -0.32
AMTR_s00029p00226370 (evm_27.TU.AmTr_v1.0_scaffold00029.353)
-1.06 -0.12 0.42 0.95 1.37 -0.92 -1.87 -1.55 -2.39 -2.27 0.58 0.73 0.69 0.07 0.38 -0.55 0.38 0.11 -0.16 -0.47 -1.58 0.09
AMTR_s00030p00110130 (evm_27.TU.AmTr_v1.0_scaffold00030.52)
0.06 0.72 0.26 -0.37 1.05 0.47 -1.68 -8.34 -2.64 -2.54 0.27 0.54 0.3 -0.25 -0.92 0.79 -1.15 0.37 0.49 0.32 -1.27 0.51
- - - 1.45 3.2 - -5.02 -6.83 -3.45 -2.66 -0.94 -0.55 0.93 -1.38 1.26 -3.39 -2.95 - -3.64 -0.59 -3.24 1.49
AMTR_s00034p00047350 (evm_27.TU.AmTr_v1.0_scaffold00034.10)
- - - 3.27 3.03 - - - - - - - - - 2.08 - - - - - - -
AMTR_s00036p00224120 (evm_27.TU.AmTr_v1.0_scaffold00036.163)
0.85 -1.0 -0.88 1.41 1.55 -0.73 -0.95 -0.72 -0.92 -0.85 0.29 0.29 0.24 -0.13 0.19 -1.15 -0.01 -0.73 -0.44 0.17 -1.15 -0.48
AMTR_s00037p00037580 (evm_27.TU.AmTr_v1.0_scaffold00037.11)
- - - 3.46 3.46 - - - - - - - - - - - - - - - - -
AMTR_s00042p00142880 (evm_27.TU.AmTr_v1.0_scaffold00042.36)
- - - 2.34 3.19 - - - - - - 2.73 - - 0.22 - - - - - - -
AMTR_s00045p00091680 (evm_27.TU.AmTr_v1.0_scaffold00045.84)
0.64 1.28 1.01 0.32 1.52 -1.95 -1.01 0.64 -1.15 -1.15 -0.01 -0.11 0.23 -0.11 -0.39 -1.56 -1.33 -0.88 -0.63 -1.4 -3.04 0.56
AMTR_s00047p00083900 (evm_27.TU.AmTr_v1.0_scaffold00047.30)
0.05 -0.43 -0.19 1.28 1.66 -4.74 -4.58 -7.51 -4.32 -3.99 0.66 0.71 1.13 -0.08 1.27 -0.46 -0.61 -0.55 -0.46 -1.1 -1.31 0.21
-0.68 -0.2 -5.09 1.54 2.92 - -5.11 -6.7 -5.89 -5.59 -0.89 0.48 -0.02 -0.13 1.08 -1.15 -1.01 -1.84 -1.93 -1.68 -3.87 1.06
-2.7 -3.75 -0.13 0.37 2.51 -5.0 -1.84 -1.82 -1.54 -2.13 -0.36 -1.01 0.54 -0.05 0.66 -0.57 0.83 -0.49 -0.49 0.86 -0.01 -0.41
AMTR_s00060p00204200 (evm_27.TU.AmTr_v1.0_scaffold00060.146)
- 0.55 - 1.79 2.22 - -3.94 - -1.65 -3.41 0.8 - -0.16 -1.5 -1.87 0.92 0.9 0.29 0.6 -0.57 0.13 -1.28
0.32 0.4 0.77 0.51 1.65 -1.41 -1.82 -0.41 -1.2 -1.34 -0.19 -0.3 0.65 -0.09 0.75 -1.29 -0.3 -1.28 -0.73 0.12 -3.19 0.68
AMTR_s00061p00136430 (evm_27.TU.AmTr_v1.0_scaffold00061.114)
- - - 2.04 4.11 - - - - - - - - - -0.84 - - - - - - -
AMTR_s00061p00199660 (evm_27.TU.AmTr_v1.0_scaffold00061.239)
- -5.27 - 1.69 1.68 - -5.23 - -3.65 -4.12 -0.88 -0.23 0.59 0.53 1.66 -1.12 -2.61 -0.42 -0.21 1.16 0.91 0.61
-3.55 - -4.33 1.08 1.73 - -5.1 -6.99 -3.54 -3.8 -0.13 0.44 1.41 0.57 1.53 0.11 -2.06 -0.33 0.28 0.5 0.02 0.24
AMTR_s00062p00187930 (evm_27.TU.AmTr_v1.0_scaffold00062.189)
- - - 3.39 3.44 - - - - - - - - - -0.6 - - - - - - -
AMTR_s00067p00139050 (evm_27.TU.AmTr_v1.0_scaffold00067.126)
-0.25 1.32 0.98 1.83 1.45 - -1.98 -3.78 -1.44 -1.54 -0.0 0.09 -0.5 -0.81 0.44 -0.09 -0.48 -0.82 -1.17 -0.56 -0.83 -0.42
-0.12 1.56 1.06 0.58 1.43 -4.3 -1.61 -1.94 -1.35 -1.29 0.25 0.29 -0.1 -0.74 0.67 -0.17 -1.5 -0.42 -0.43 -0.08 -1.32 -0.35
AMTR_s00071p00042730 (evm_27.TU.AmTr_v1.0_scaffold00071.22)
- - 0.04 0.97 1.65 -2.62 -1.05 - -1.81 -2.0 0.48 0.66 1.41 0.07 0.8 -1.71 -1.28 0.25 0.12 0.51 -1.99 0.69
AMTR_s00074p00135680 (evm_27.TU.AmTr_v1.0_scaffold00074.47)
- - - 2.45 2.59 - -1.54 - -1.83 -0.99 - - -2.0 -1.68 0.91 - - - - - 2.75 -2.27
AMTR_s00077p00103150 (evm_27.TU.AmTr_v1.0_scaffold00077.86)
- 2.85 0.72 2.9 1.91 -0.09 - - -5.74 - - - - -5.46 -0.44 - - - - -2.41 - -4.91
AMTR_s00078p00077700 (evm_27.TU.AmTr_v1.0_scaffold00078.50)
-2.86 0.56 -1.22 1.55 1.63 -7.1 -1.85 -1.55 -0.86 -0.81 0.62 0.08 0.74 0.78 0.24 -1.51 -1.9 0.41 0.33 -0.63 -5.38 0.22
AMTR_s00085p00099740 (evm_27.TU.AmTr_v1.0_scaffold00085.60)
-0.43 0.49 -0.62 0.13 2.08 -1.18 -1.65 -0.53 -1.87 -1.75 0.07 -0.01 0.67 0.26 0.63 0.07 -0.51 -0.45 -0.42 -0.47 -1.4 0.21
AMTR_s00095p00137540 (evm_27.TU.AmTr_v1.0_scaffold00095.100)
0.38 0.53 0.55 -0.27 2.49 -5.98 -3.37 -6.09 -4.16 -3.55 0.2 -0.27 0.57 -0.15 0.79 -0.06 -0.15 -1.05 -1.05 -0.34 -1.76 0.1
AMTR_s00103p00113520 (evm_27.TU.AmTr_v1.0_scaffold00103.67)
0.14 -0.12 -1.16 1.21 1.57 - -1.62 -6.57 0.21 0.04 -0.33 0.07 0.55 0.23 1.05 -1.15 -0.39 -1.13 -0.83 0.21 -0.14 -0.18
AMTR_s00109p00132480 (evm_27.TU.AmTr_v1.0_scaffold00109.138)
0.57 1.24 1.34 1.81 1.45 -4.25 -1.15 -0.98 -2.28 -1.95 -0.14 -0.45 -0.44 -0.68 -0.25 -1.9 0.62 -1.32 -1.2 -1.4 -2.68 -0.18
AMTR_s00119p00034140 (evm_27.TU.AmTr_v1.0_scaffold00119.17)
- 2.14 - 2.44 3.13 - - - - - 1.45 - -1.88 - -1.19 - - - - - - -
AMTR_s00119p00136700 (evm_27.TU.AmTr_v1.0_scaffold00119.114)
-0.59 1.39 -0.07 0.4 0.96 0.46 -0.21 -1.18 -0.99 -1.04 0.27 0.3 -0.05 0.11 0.0 -0.1 -0.7 -0.16 -0.02 -0.49 -1.26 -0.37
-1.1 0.46 0.94 -5.28 2.44 -4.66 -1.05 -2.71 -0.94 -0.88 -0.91 -0.64 -0.14 0.75 1.25 -0.4 0.41 -1.46 -1.53 -0.75 -1.33 0.18
-1.62 0.44 0.89 -3.43 2.34 -2.16 -0.54 -1.61 -0.93 -0.61 -0.78 -0.68 0.32 0.8 1.22 -0.56 -0.17 -1.15 -1.34 -0.85 -1.54 0.1
0.44 1.06 0.71 0.29 1.46 -2.09 -2.77 -6.22 -2.84 -2.58 0.79 1.28 0.22 -0.19 0.86 -0.93 -1.67 -0.41 -1.27 -2.15 -5.13 0.99
1.33 0.66 0.61 -0.17 2.17 -0.42 -1.36 -0.06 -1.15 -0.93 -0.76 -0.52 0.46 -0.66 0.01 -0.63 -0.57 -1.11 -0.93 -1.14 -1.92 -0.76
1.24 0.77 0.73 -0.54 1.39 0.32 -1.71 -1.27 -1.46 -1.34 -0.25 0.8 0.67 -0.24 0.67 -1.63 -0.89 -1.22 -1.45 -0.11 -1.43 -0.59
AMTR_s00136p00089480 (evm_27.TU.AmTr_v1.0_scaffold00136.46)
- - - 2.66 2.39 - - - -1.1 -1.65 0.25 - 0.2 -1.16 0.53 - 1.05 - -1.26 -0.77 0.74 -0.51
AMTR_s00148p00035770 (evm_27.TU.AmTr_v1.0_scaffold00148.16)
0.66 1.24 0.7 -0.48 1.56 -0.17 -0.45 0.11 -1.48 -1.22 -0.46 -0.3 -0.33 -0.82 -0.63 0.07 -0.52 -0.36 0.02 -0.42 -1.37 0.09
AMTR_s00149p00083940 (evm_27.TU.AmTr_v1.0_scaffold00149.68)
0.83 -0.3 -0.28 1.32 2.18 -6.48 -3.01 -1.91 -1.71 -1.82 -0.27 0.25 0.37 -0.06 0.73 -1.15 -0.49 -0.57 -0.43 -0.62 -1.14 -0.05
-1.32 -0.98 -1.75 -2.72 2.91 -7.15 -5.9 -6.09 -4.54 -4.98 0.06 0.52 0.79 0.58 1.24 0.2 -0.18 -1.8 -1.26 -1.09 -1.93 0.58
1.18 0.71 1.05 0.45 1.39 -1.14 -0.55 -0.36 -0.3 -0.19 -0.09 0.2 0.12 -0.24 0.02 -1.97 -1.4 -0.3 -0.97 -2.54 -2.38 0.15
AMTR_s00164p00050110 (evm_27.TU.AmTr_v1.0_scaffold00164.19)
0.35 0.21 0.92 0.1 1.58 0.21 -0.39 -0.54 -0.8 -0.6 -0.13 -0.29 0.11 -0.18 0.38 -0.75 -0.57 -0.8 -0.3 -0.35 -2.02 0.12
AMTR_s00204p00016280 (evm_27.TU.AmTr_v1.0_scaffold00204.14)
- - - 0.12 2.2 - -1.17 - -0.08 -1.21 -1.42 1.66 0.46 -0.16 0.81 -1.22 -1.11 -0.85 0.08 0.09 1.31 -0.21
-0.27 1.1 -4.78 0.15 0.91 -0.25 -0.6 -8.09 -1.13 -1.15 0.72 0.77 0.29 0.16 -1.37 0.46 -0.11 1.27 0.1 -0.96 -1.62 -0.16
AMTR_s00888p00003850 (evm_27.TU.AmTr_v1.0_scaffold00888.1)
- - - 2.82 2.93 - 0.7 - -0.48 -0.87 - - -2.86 -1.26 -1.64 - - - - -1.21 1.64 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.