AMTR_s00067p00124040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.103

No description available


Gene families : OG0003966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00124040
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00090550 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G04690 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT5G35810 No alias Ankyrin repeat family protein 0.05 OrthoFinder output from all 47 species
GSVIVT01001211001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01001213001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01001215001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01003103001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01003110001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01003646001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01005246001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01005252001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01010204001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01011198001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01011216001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01017540001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019314001 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g068600.3.1 Solyc02g068600 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc02g068670.3.1 Solyc02g068670 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g098390.3.1 Solyc12g098390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 193 278
IPR026961 PGG_dom 585 696
No external refs found!