AMTR_s00067p00091510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.68

Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00091510
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.04 OrthoFinder output from all 47 species
Ala_g15216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20983.t1 Aspi01Gene20983 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34497.t1 Aspi01Gene34497 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z179700.1 Ceric.1Z179700 not classified & original description: pacid=50596893... 0.02 OrthoFinder output from all 47 species
Ceric.33G013700.1 Ceric.33G013700 not classified & original description: pacid=50607125... 0.02 OrthoFinder output from all 47 species
Dac_g32097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_35317 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os02g13190.1 LOC_Os02g13190 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g13220.1 LOC_Os02g13220 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g04570.1 LOC_Os05g04570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g01100.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g17910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g29340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g080850.1.1 Solyc02g080850 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e014444_P001 Zm00001e014444 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!