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  5. AMTR_s00066p00135670

AMTR_s00066p00135670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.130

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00135670

Target Alias Description ECC score Gene Family Method Actions
AT1G05660 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43880 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43890 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Solyc02g067630.3.1 Solyc02g067630 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc02g067640.3.1 Solyc02g067640 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Solyc08g014540.1.1 Solyc08g014540 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc12g019140.3.1 Solyc12g019140 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Solyc12g019180.2.1 Solyc12g019180 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Solyc12g096730.3.1 Solyc12g096730 Polygalacturonase OS=Prunus persica... 0.01 OrthoFinder output from all 47 species
Solyc12g096750.2.1 Solyc12g096750 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 53 376
No external refs found!