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  5. AMTR_s00066p00096020

AMTR_s00066p00096020 (GDI2, ATGDI2,...)


Aliases : GDI2, ATGDI2, evm_27.TU.AmTr_v1.0_scaffold00066.78

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)


Gene families : OG0002116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00096020

Target Alias Description ECC score Gene Family Method Actions
Als_g14262 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Aob_g07229 GDI2, ATGDI2 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Aop_g01791 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Ceric.05G086400.1 Ceric.05G086400 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.04 OrthoFinder output from all 47 species
Ceric.12G005600.1 ATGDI1, AT-GDI1,... RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.05 OrthoFinder output from all 47 species
Cre09.g388467 No alias Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
Dcu_g06290 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Ehy_g03780 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01038268001 GDI2, ATGDI2 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
LOC_Os05g34540.1 ATGDI1, AT-GDI1,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.03 OrthoFinder output from all 47 species
Len_g09591 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Msp_g10692 No alias RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Nbi_g21880 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002983 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Sam_g14715 No alias RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Smo271917 ATGDI1, AT-GDI1, GDI1 Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Solyc08g015860.3.1 GDI2, ATGDI2,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.04 OrthoFinder output from all 47 species
Solyc12g017570.2.1 GDI2, ATGDI2,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.04 OrthoFinder output from all 47 species
Tin_g12403 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Zm00001e027047_P001 GDI2, ATGDI2,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018203 GDP_dissociation_inhibitor 1 433
No external refs found!