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  5. AMTR_s00064p00187430

AMTR_s00064p00187430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00064.82

Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0005393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00064p00187430

Target Alias Description ECC score Gene Family Method Actions
Adi_g045220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033559001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.05 OrthoFinder output from all 47 species
Gb_19145 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 OrthoFinder output from all 47 species
LOC_Os06g30380.1 LOC_Os06g30380 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.02 OrthoFinder output from all 47 species
Lfl_g05631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024384 No alias not classified & original description: CDS=72-1961 0.03 OrthoFinder output from all 47 species
Solyc01g006180.4.1 Solyc01g006180 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 OrthoFinder output from all 47 species
Spa_g00420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024057_P001 Zm00001e024057 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 358 423
No external refs found!