AMTR_s00064p00080140 (ATRNS1, RNS1,...)

Aliases : ATRNS1, RNS1, evm_27.TU.AmTr_v1.0_scaffold00064.26

Description : Ribonuclease 1 OS=Arabidopsis thaliana

Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00064p00080140

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00114570	evm_27.TU.AmTr_v1...	No description available	0.05	OrthoFinder output from all 47 species
Azfi_s0007.g011037	ATRNS1, RNS1	T2-type RNase *(RNS) & original description: CDS=123-812	0.03	OrthoFinder output from all 47 species
MA_4032367g0010	RNS3	Ribonuclease 3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Msp_g44320	ATRNS1, RNS1	T2-type RNase *(RNS) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g082890.4.1	RNS2, Solyc06g082890	Ribonuclease 2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016849	phosphorus-oxygen lyase activity	None	Extended
MF	GO:0033897	ribonuclease T2 activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001568	RNase_T2-like	3	119

External Links

No external refs found!