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  5. AMTR_s00063p00197920

AMTR_s00063p00197920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00063.78

Description : Rho GTPase-activating protein 7 OS=Arabidopsis thaliana


Gene families : OG0001811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00063p00197920

Target Alias Description ECC score Gene Family Method Actions
AT5G12150 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.03 OrthoFinder output from all 47 species
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.04 OrthoFinder output from all 47 species
Adi_g057671 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20968 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11821 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09484 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70602 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38069.t1 Aspi01Gene38069 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023819 No alias ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G041800.1 Ceric.11G041800 ROP-activating protein *(RenGAP) & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g09456 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01869 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01978 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os03g15180.1 REN1, LOC_Os03g15180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g24180.1 LOC_Os03g24180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g16703 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12960 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02003 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13925 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008570 No alias ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g39070 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g008770.3.1 Solyc01g008770 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Spa_g01358 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30873 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005543 phospholipid binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 601 687
IPR001849 PH_domain 21 124
IPR000198 RhoGAP_dom 181 325
No external refs found!