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  5. AMTR_s00062p00183460

AMTR_s00062p00183460 (ZIP1,...)


Aliases : ZIP1, evm_27.TU.AmTr_v1.0_scaffold00062.177

Description : Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (ZIP-type)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00183460
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00182850 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00184330 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AT1G60960 IRT3, ATIRT3 iron regulated transporter 3 0.05 OrthoFinder output from all 47 species
AT4G19690 ATIRT1, IRT1 iron-regulated transporter 1 0.02 OrthoFinder output from all 47 species
Aev_g07079 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g06465 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0014.g013568 ZIP1 metal cation transporter *(ZIP) & original description: CDS=1-972 0.04 OrthoFinder output from all 47 species
Ceric.14G032100.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g13090 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31389 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03468 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032785001 ATZIP6, ZIP6 Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
Gb_00356 ATZIP6, ZIP6 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
LOC_Os03g46470.1 ZIP10, LOC_Os03g46470 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g52310.1 ZIP1, LOC_Os04g52310 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07210.1 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os05g10940.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g37010.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g12890.1 ZIP1, LOC_Os07g12890 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Len_g45330 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_31095g0010 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
MA_6126514g0010 ZIP1 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Nbi_g18185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15813 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28648 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10690 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17347 ZIP7 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo91749 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc07g043230.3.1 ZIP3, Solyc07g043230 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e027487_P001 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e033157_P001 ZIP5, Zm00001e033157 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 43 349
No external refs found!