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  5. AMTR_s00062p00143230

AMTR_s00062p00143230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.127

No description available


Gene families : OG0007675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00143230
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT4G21820 No alias binding;calmodulin binding 0.13 OrthoFinder output from all 47 species
Aop_g05233 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species
Aspi01Gene14455.t1 Aspi01Gene14455 regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species
Azfi_s0004.g008280 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species
Ceric.23G023300.1 Ceric.23G023300 regulatory protein *(ASPM) of microtubule minus-end... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001335.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g281200 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g09930 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.09 OrthoFinder output from all 47 species
GSVIVT01002377001 No alias No description available 0.12 OrthoFinder output from all 47 species
Gb_33771 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_33772 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g33370.1 LOC_Os07g33370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g09758 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species
MA_10431293g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g06540.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Msp_g38961 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.11 OrthoFinder output from all 47 species
Nbi_g08418 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.11 OrthoFinder output from all 47 species
Ppi_g30759 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006557 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.03 OrthoFinder output from all 47 species
Solyc02g080400.3.1 Solyc02g080400 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Tin_g13979 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000247 C-8 sterol isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006696 ergosterol biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008204 ergosterol metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044107 cellular alcohol metabolic process IEP HCCA
BP GO:0044108 cellular alcohol biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097384 cellular lipid biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
BP GO:1902653 secondary alcohol biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 431 521
IPR001715 CH_dom 557 669
No external refs found!