1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00061p00196800

AMTR_s00061p00196800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.232

Description : Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group


Gene families : OG0005703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005703_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00196800

Target Alias Description ECC score Gene Family Method Actions
AT3G07670 No alias Rubisco methyltransferase family protein 0.05 OrthoFinder output from all 47 species
Aop_g15402 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30703.t1 Aspi01Gene30703 lysine N-methyltransferase involved in RuBisCo... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009600 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.20G040500.1 Ceric.20G040500 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.100 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
Dac_g19080 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g28311 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
GSVIVT01030117001 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.09 OrthoFinder output from all 47 species
Gb_10724 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_10725 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g49326.1 LOC_Os02g49326 Enzyme classification.EC_2 transferases.EC_2.1... 0.06 OrthoFinder output from all 47 species
Len_g20287 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Lfl_g26901 No alias EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Pir_g18681 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ppi_g61927 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Smo80789 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
Solyc07g045310.4.1 Solyc07g045310 Enzyme classification.EC_2 transferases.EC_2.1... 0.11 OrthoFinder output from all 47 species
Tin_g30125 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e023409_P003 Zm00001e023409 Enzyme classification.EC_2 transferases.EC_2.1... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 372 508
IPR001214 SET_dom 136 340
No external refs found!