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  5. AMTR_s00061p00179340

AMTR_s00061p00179340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.192

Description : Fatty-acid-binding protein 1 OS=Arabidopsis thaliana


Gene families : OG0001284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00179340
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Aob_g02956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13505.t1 Aspi01Gene13505 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17645 No alias Fatty-acid-binding protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g49702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0174.g024535 No alias not classified & original description: CDS=72-1286 0.02 OrthoFinder output from all 47 species
Solyc02g067870.3.1 Solyc02g067870 Fatty-acid-binding protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010590_P002 Zm00001e010590 Fatty-acid-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 21 205
No external refs found!