Heatmap: Cluster_75 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00272030 (evm_27.TU.AmTr_v1.0_scaffold00002.656)
- - - - -3.2 - - - -4.38 -4.63 - - - - -1.84 4.43 - - - - - -
AMTR_s00002p00272040 (evm_27.TU.AmTr_v1.0_scaffold00002.657)
- - - -9.75 -7.9 - -10.53 -9.81 -8.75 -10.49 -8.2 -6.03 -7.32 -10.78 -9.81 4.45 -6.31 -7.22 -9.38 -10.67 -7.38 -5.53
AMTR_s00004p00226930 (evm_27.TU.AmTr_v1.0_scaffold00004.220)
- - - - -1.62 - - - - - - 0.16 -4.03 -4.12 - 4.29 - - - - - -0.25
AMTR_s00005p00263860 (evm_27.TU.AmTr_v1.0_scaffold00005.215)
- -2.74 -1.67 - -1.59 - - - - - - - - -3.2 -0.92 4.34 - - - - - -1.98
- -1.0 - - -7.7 - - - -10.72 -9.66 -2.07 -2.0 -4.27 -7.63 -7.56 4.38 -3.97 -7.19 -8.36 -7.68 - -4.59
AMTR_s00009p00138690 (evm_27.TU.AmTr_v1.0_scaffold00009.80)
-2.74 -2.83 -4.6 -7.49 -10.8 -6.99 -15.52 - -18.39 -17.63 -5.41 -3.81 -1.48 -4.33 -7.65 4.39 -11.16 -7.44 -7.3 -15.11 -10.36 -3.01
- - - - -1.19 -0.95 -1.19 - -3.1 -3.06 - -1.39 -7.29 -4.23 1.08 4.15 - - - - - -6.73
AMTR_s00013p00223970 (evm_27.TU.AmTr_v1.0_scaffold00013.160)
- - - - 0.34 - - - 1.18 - - - - - -0.29 4.14 - - - - - -
AMTR_s00016p00122150 (evm_27.TU.AmTr_v1.0_scaffold00016.83)
0.7 - - - 1.21 - -5.17 - -6.12 -5.06 -2.49 -1.28 -1.17 -4.2 -1.21 4.01 -3.09 - - -5.55 -3.62 -2.47
- - - -2.3 1.58 - -4.15 - -3.44 -3.61 - -2.05 -0.81 -2.51 0.15 3.77 -1.11 -2.24 -1.41 -1.62 -0.08 -1.1
AMTR_s00016p00253610 (evm_27.TU.AmTr_v1.0_scaffold00016.315)
- - - -3.56 -3.03 - - - - - - -1.19 - - -1.63 4.39 - - - - - -
- - - -7.02 0.18 - -1.88 - -2.03 -2.02 -5.15 0.55 -5.41 -4.03 -0.15 4.03 -2.76 -4.6 -2.28 -4.89 -0.43 -3.89
AMTR_s00023p00226790 (evm_27.TU.AmTr_v1.0_scaffold00023.173)
- - - - 1.43 - - - - - - - - - - 4.27 - - - - - -
AMTR_s00025p00080690 (evm_27.TU.AmTr_v1.0_scaffold00025.61)
- - - - -0.12 - - - -5.26 -4.0 -1.87 0.48 -0.61 -6.86 0.33 4.03 -0.75 - - - - -1.24
AMTR_s00025p00234250 (evm_27.TU.AmTr_v1.0_scaffold00025.349)
- - - - -7.83 - - - - - - - -4.49 -5.57 -5.69 4.45 - - - - - -
AMTR_s00025p00236620 (evm_27.TU.AmTr_v1.0_scaffold00025.352)
- - - - -8.79 - -10.44 - -10.21 - - - -4.45 -4.76 -7.4 4.45 -7.78 - - -9.77 - -9.54
AMTR_s00027p00231830 (evm_27.TU.AmTr_v1.0_scaffold00027.114)
- - - - 0.86 - - - - - - - - - - 4.22 - - 0.43 - - -2.09
AMTR_s00027p00234720 (evm_27.TU.AmTr_v1.0_scaffold00027.120)
- - - - - - -5.85 - -3.83 -5.7 - -0.82 -4.82 -0.93 - 4.34 - - -1.08 - - -
AMTR_s00033p00243500 (evm_27.TU.AmTr_v1.0_scaffold00033.265)
- - - - 0.15 - -1.99 - -1.85 -1.55 - - -3.73 - -0.47 4.24 - - - -1.87 - -
AMTR_s00034p00237580 (evm_27.TU.AmTr_v1.0_scaffold00034.120)
- 0.27 0.36 - 0.17 - - - - -1.6 - - - 0.81 - 4.03 - - - - - -
AMTR_s00037p00221640 (evm_27.TU.AmTr_v1.0_scaffold00037.126)
- - - - - - - - - - - - - - - 4.46 - - - - - -
- - - - -2.3 - -5.47 - -5.36 -5.32 -3.33 - - -6.71 -2.83 4.33 -3.66 - -3.33 - - 0.17
AMTR_s00049p00189040 (evm_27.TU.AmTr_v1.0_scaffold00049.191)
- - - -3.5 0.53 - -2.23 - -4.26 -2.85 - - -1.51 -2.52 -2.11 4.25 - - - -2.4 - -2.86
AMTR_s00056p00188310 (evm_27.TU.AmTr_v1.0_scaffold00056.169)
-1.4 -1.67 -2.45 -4.38 -2.56 -3.73 -4.35 -4.57 -5.12 -4.9 -6.48 -6.69 -1.15 -0.19 -2.23 4.26 -12.41 -8.88 -8.72 -8.94 -9.62 -8.13
- - - - -3.09 - - - -4.52 - -1.54 - -0.94 -4.92 -1.25 4.3 -2.48 - -1.69 -2.21 - -4.02
-4.01 -4.85 -6.9 -10.33 -7.53 - -10.82 - -12.3 -12.79 -4.01 -7.16 -2.49 -11.43 -7.7 4.38 -1.48 -8.47 -9.02 -11.83 -11.8 -1.23
AMTR_s00059p00089270 (evm_27.TU.AmTr_v1.0_scaffold00059.64)
- - - -3.02 -2.12 - -6.91 - - - -3.11 - -3.37 - -3.78 4.32 -5.49 - -4.71 - - 0.34
AMTR_s00061p00179340 (evm_27.TU.AmTr_v1.0_scaffold00061.192)
- - - - 1.06 - - - - - - - - - - 4.28 - - - - - -0.97
AMTR_s00067p00027690 (evm_27.TU.AmTr_v1.0_scaffold00067.12)
-0.42 - - - -1.13 - - - - -4.8 - - -2.85 -4.16 -5.35 4.35 - - - - - -2.43
AMTR_s00071p00129830 (evm_27.TU.AmTr_v1.0_scaffold00071.112)
-2.86 - - - - - - - - - - - -3.38 - -4.68 4.4 -1.63 - - -1.55 - -
AMTR_s00071p00130010 (evm_27.TU.AmTr_v1.0_scaffold00071.113)
- - - - -5.57 - - - - - - - -1.99 - -4.28 4.37 - - - -3.48 -0.22 -4.03
AMTR_s00071p00133060 (evm_27.TU.AmTr_v1.0_scaffold00071.117)
- - - -0.76 0.92 - - 0.16 - - - - - - -5.53 4.16 -1.58 - - -3.21 - -4.2
AMTR_s00071p00189860 (evm_27.TU.AmTr_v1.0_scaffold00071.199)
- - - - -7.15 - - - -4.1 -5.02 - - - - -7.87 4.45 - - - - - -
- - - -8.09 -2.17 - -3.98 -3.56 -3.95 -4.25 -3.85 -3.65 -3.07 -3.08 -3.45 4.22 -3.14 -2.85 -2.77 -1.66 -2.42 0.57
AMTR_s00076p00142160 (evm_27.TU.AmTr_v1.0_scaffold00076.44)
- - - -3.67 -0.85 - - - - - - - -4.48 -1.86 -1.83 4.37 - - - - - -3.33
AMTR_s00078p00175340 (evm_27.TU.AmTr_v1.0_scaffold00078.168)
- - - - -5.0 - - - - - - - -5.11 -5.41 - 4.45 - - - - - -
AMTR_s00090p00147560 (evm_27.TU.AmTr_v1.0_scaffold00090.80)
- - - - - - - - - - - - - 0.27 -3.61 4.37 - - - - - -
- - - - -0.59 - - - - - - -0.71 - -2.99 - 4.36 - - - - - -
- - - - -4.48 - -10.53 - -11.11 - -3.94 -2.89 -0.38 -5.64 -7.23 4.33 -4.93 - -6.23 -7.81 - -0.3
AMTR_s00126p00044840 (evm_27.TU.AmTr_v1.0_scaffold00126.12)
- - - - 1.76 - -3.43 - - - - - - - -2.12 4.19 - - - - - -
AMTR_s00154p00039580 (evm_27.TU.AmTr_v1.0_scaffold00154.22)
-0.25 0.43 -0.73 - -5.17 -4.37 -11.12 - -8.92 -8.06 -7.18 -4.4 -0.96 0.2 -5.64 4.1 - -6.59 -7.75 -8.85 - -2.16
AMTR_s00154p00044230 (evm_27.TU.AmTr_v1.0_scaffold00154.27)
-1.69 -0.65 -2.08 - -7.75 - - - - -9.49 - - -2.15 -0.34 -8.5 4.3 - - - - - -3.39
- - - - - - - - - - - - - -0.48 - 4.41 - - - - - -
AMTR_s00168p00064780 (evm_27.TU.AmTr_v1.0_scaffold00168.24)
- - - - - - - - -1.59 - - - - - -1.08 4.41 - - - - - -
AMTR_s00168p00065430 (evm_27.TU.AmTr_v1.0_scaffold00168.25)
- - - - 0.48 - - - -1.97 -2.73 - - - - - 4.32 - - - - - -2.09
AMTR_s03607p00008050 (evm_27.TU.AmTr_v1.0_scaffold03607.1)
- - - - 1.12 - - - - - - - - - - 4.31 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.