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Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.80
No description available
Gene families : OG0002840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002840_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00061p00104430 | |
| Cluster | HCCA: Cluster_100 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G24610 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G48310 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.13 | OrthoFinder output from all 47 species | |
| Adi_g023654 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30228 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27706 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g46644 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g48683 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g06288 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene35489.t2 | Aspi01Gene35489 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009826 | No alias | not classified & original description: CDS=337-4263 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14978 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G053000.1 | Ceric.14G053000 | not classified & original description: pacid=50633866... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.28G050300.1 | Ceric.28G050300 | not classified & original description: pacid=50570129... | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g278212 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13433 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13512 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01030144001 | No alias | No description available | 0.11 | OrthoFinder output from all 47 species | |
| Gb_02174 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_04081 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g10490.1 | LOC_Os02g10490 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g52280.1 | LOC_Os02g52280 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g45859 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g37322 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g39844 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| MA_10107198g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| MA_1132025g0010 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| MA_134242g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_32509g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| MA_7663039g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g17040.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03853 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25115 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g30529 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17841 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g07979 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo93144 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g076100.4.1 | Solyc04g076100 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g056060.4.1 | Solyc07g056060 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e014046_P002 | Zm00001e014046 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0001882 | nucleoside binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006304 | DNA modification | IEP | HCCA |
| BP | GO:0006305 | DNA alkylation | IEP | HCCA |
| BP | GO:0006306 | DNA methylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| CC | GO:0042555 | MCM complex | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |