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  5. AMTR_s00060p00187100

AMTR_s00060p00187100 (MEE11,...)


Aliases : MEE11, evm_27.TU.AmTr_v1.0_scaffold00060.123

Description : F-box protein SKIP28 OS=Arabidopsis thaliana


Gene families : OG0001985 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001985_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00187100
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene68042.t1 Aspi01Gene68042 substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Lfl_g01881 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
MA_19507g0010 No alias F-box protein SKIP14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g25210.1 MEE11 F-box protein SKIP14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g12870.1 No alias F-box protein SKIP28 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g18344 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g32310 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc01g005450.3.1 MEE11, Solyc01g005450 F-box protein SKIP28 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g024940.3.1 Solyc04g024940 F-box protein SKIP14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g01101 No alias substrate adaptor *(RIFP1) of SCF E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 11 52
No external refs found!