1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00060p00156120

AMTR_s00060p00156120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.90

No description available


Gene families : OG0003489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003489_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00156120

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10513.t1 Aspi01Gene10513 regulatory protein of RNA homeostasis & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene12551.t1 Aspi01Gene12551 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G081500.1 Ceric.06G081500 regulatory protein of RNA homeostasis & original... 0.01 OrthoFinder output from all 47 species
Pir_g54698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g008670.3.1 Solyc05g008670 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 137 163
No external refs found!