Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.238
Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase
Gene families : OG0003404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003404_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00059p00207710 | |
Cluster | HCCA: Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G07830 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01028044001 | PGA4 | Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030017001 | No alias | Polygalacturonase OS=Gossypium hirsutum | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01035103001 | No alias | Exopolygalacturonase (Fragment) OS=Platanus acerifolia | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g33300.1 | LOC_Os01g33300 | Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g10300.1 | LOC_Os02g10300 | Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g044870.4.1 | Solyc07g044870 | Polygalacturonase OS=Nicotiana tabacum... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g006293.1.1 | Solyc12g006293 | Polygalacturonase OS=Nicotiana tabacum... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g006313.1.1 | Solyc12g006313 | Polygalacturonase OS=Nicotiana tabacum... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014076_P001 | Zm00001e014076 | Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030528_P001 | Zm00001e030528 | Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e030529_P001 | Zm00001e030529 | Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030534_P001 | Zm00001e030534 | Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e030535_P001 | Zm00001e030535 | Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e030537_P001 | Zm00001e030537 | Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 94 | 421 |
No external refs found! |