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  5. AMTR_s00059p00207430

AMTR_s00059p00207430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.237

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0003404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00207430

Target Alias Description ECC score Gene Family Method Actions
AT3G14040 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01028044001 PGA4 Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030017001 No alias Polygalacturonase OS=Gossypium hirsutum 0.05 OrthoFinder output from all 47 species
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.03 OrthoFinder output from all 47 species
Zm00001e014066_P002 Zm00001e014066 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species
Zm00001e026354_P001 Zm00001e026354 Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006909 phagocytosis IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017089 glycolipid transfer activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046836 glycolipid transport IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051861 glycolipid binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 61 392
No external refs found!