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  5. AMTR_s00059p00183340

AMTR_s00059p00183340 (HCF164,...)


Aliases : HCF164, evm_27.TU.AmTr_v1.0_scaffold00059.198

Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.HCF164 thioredoxin-like factor


Gene families : OG0006010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00183340

Target Alias Description ECC score Gene Family Method Actions
Ala_g01048 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Als_g11520 HCF164 protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
Aob_g01003 HCF164 protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
Aspi01Gene48086.t1 HCF164, Aspi01Gene48086 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G044400.1 HCF164, Ceric.29G044400 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Dac_g03170 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Dcu_g47105 HCF164 protein involved in cytochrome b6/f complex assembly... 0.07 OrthoFinder output from all 47 species
Dde_g01274 HCF164 protein involved in cytochrome b6/f complex assembly... 0.08 OrthoFinder output from all 47 species
Ehy_g06408 HCF164 protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
Ehy_g23323 HCF164 protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
GSVIVT01003777001 HCF164 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Gb_14739 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.04 OrthoFinder output from all 47 species
Len_g01077 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Len_g42474 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Lfl_g02690 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
MA_10429518g0010 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.09 OrthoFinder output from all 47 species
Mp4g10810.1 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.02 OrthoFinder output from all 47 species
Nbi_g12738 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Ore_g25849 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Pir_g14034 HCF164 protein involved in cytochrome b6/f complex assembly... 0.07 OrthoFinder output from all 47 species
Pp3c22_350V3.1 HCF164, Pp3c22_350 Thioredoxin superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g28646 No alias protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Solyc07g064940.3.1 HCF164, Solyc07g064940 HCF164 protein involved in cytochrome b6/f complex assembly 0.03 OrthoFinder output from all 47 species
Zm00001e011960_P001 HCF164, Zm00001e011960 HCF164 protein involved in cytochrome b6/f complex assembly 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 94 187
No external refs found!