AMTR_s00059p00159100 (CLB6, ISPH, HDR,...)


Aliases : CLB6, ISPH, HDR, evm_27.TU.AmTr_v1.0_scaffold00059.146

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate reductase


Gene families : OG0002959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002959_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00159100
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT4G34350 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.05 OrthoFinder output from all 47 species
Adi_g009473 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.02 OrthoFinder output from all 47 species
Aev_g07104 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Als_g32656 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.02 OrthoFinder output from all 47 species
Als_g48020 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.02 OrthoFinder output from all 47 species
Aob_g06578 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Aop_g00615 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.08 OrthoFinder output from all 47 species
Cba_g19279 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Cba_g25023 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.05 OrthoFinder output from all 47 species
Ceric.03G069700.1 CLB6, ISPH, HDR,... 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Cre08.g372950 CLB6, ISPH, HDR Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species
Dac_g31086 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
LOC_Os03g52170.1 CLB6, ISPH, HDR,... 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.03 OrthoFinder output from all 47 species
Len_g23674 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
MA_10431651g0010 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.07 OrthoFinder output from all 47 species
MA_13946g0010 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.04 OrthoFinder output from all 47 species
Mp5g09880.1 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.02 OrthoFinder output from all 47 species
Msp_g19463 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Nbi_g01109 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.03 OrthoFinder output from all 47 species
Ore_g07283 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.02 OrthoFinder output from all 47 species
Solyc01g109300.3.1 CLB6, ISPH, HDR,... 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.04 OrthoFinder output from all 47 species
Spa_g09223 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
Tin_g05605 CLB6, ISPH, HDR 4-hydroxy-3-methylbut-2-enyl diphosphate reductase &... 0.04 OrthoFinder output from all 47 species
Zm00001e005577_P002 CLB6, ISPH, HDR,... 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003451 LytB/IspH 114 454
No external refs found!