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  5. AMTR_s00059p00138820

AMTR_s00059p00138820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.121

No description available


Gene families : OG0001730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00138820

Target Alias Description ECC score Gene Family Method Actions
AT1G53800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aob_g02043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40760.t1 Aspi01Gene40760 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g12354.1 LOC_Os10g12354 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11885 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001251 No alias not classified & original description: CDS=64-1719 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012057 No alias not classified & original description: CDS=33-1778 0.02 OrthoFinder output from all 47 species
Solyc03g123700.4.1 Solyc03g123700 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e006550_P001 Zm00001e006550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!