AMTR_s00059p00069290 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.44

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit

Gene families : OG0004080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004080_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00059p00069290

Target	Alias	Description	ECC score	Gene Family Method
AT4G34450	No alias	coatomer gamma-2 subunit, putative / gamma-2 coat...	0.09	OrthoFinder output from all 47 species
Adi_g106385	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.03	OrthoFinder output from all 47 species
Aev_g14556	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.03	OrthoFinder output from all 47 species
Aev_g44391	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.02	OrthoFinder output from all 47 species
Ala_g05681	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.06	OrthoFinder output from all 47 species
Als_g23314	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.05	OrthoFinder output from all 47 species
Aob_g15373	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.03	OrthoFinder output from all 47 species
Aop_g06505	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene67594.t1	Aspi01Gene67594	non-SNARE-type phytolongin & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0288.g063235	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.02	OrthoFinder output from all 47 species
Cba_g11359	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.02	OrthoFinder output from all 47 species
Ceric.04G110200.1	Ceric.04G110200	subunit gamma of cargo adaptor F-subcomplex & original...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020629.20	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
Cre06.g310750	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.05	OrthoFinder output from all 47 species
Dcu_g01867	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.05	OrthoFinder output from all 47 species
Dde_g05374	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.06	OrthoFinder output from all 47 species
Ehy_g29298	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01031955001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.05	OrthoFinder output from all 47 species
Gb_36850	No alias	subunit gamma of cargo adaptor F-subcomplex	0.08	OrthoFinder output from all 47 species
LOC_Os03g12590.1	LOC_Os03g12590	subunit gamma of cargo adaptor F-subcomplex	0.09	OrthoFinder output from all 47 species
LOC_Os07g10150.1	LOC_Os07g10150	subunit gamma of cargo adaptor F-subcomplex	0.08	OrthoFinder output from all 47 species
Len_g13320	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.04	OrthoFinder output from all 47 species
Lfl_g02207	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.05	OrthoFinder output from all 47 species
Mp1g05250.1	No alias	subunit gamma of cargo adaptor F-subcomplex	0.06	OrthoFinder output from all 47 species
Msp_g24101	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.05	OrthoFinder output from all 47 species
Nbi_g10516	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.07	OrthoFinder output from all 47 species
Ore_g06577	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.03	OrthoFinder output from all 47 species
Pir_g10430	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.05	OrthoFinder output from all 47 species
Ppi_g01355	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011888	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.03	OrthoFinder output from all 47 species
Smo268757	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
Solyc01g109540.4.1	Solyc01g109540	subunit gamma of cargo adaptor F-subcomplex	0.1	OrthoFinder output from all 47 species
Spa_g17860	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.05	OrthoFinder output from all 47 species
Tin_g11774	No alias	subunit gamma of cargo adaptor F-subcomplex & original...	0.04	OrthoFinder output from all 47 species
Zm00001e000949_P001	Zm00001e000949	subunit gamma of cargo adaptor F-subcomplex	0.06	OrthoFinder output from all 47 species
Zm00001e011398_P002	Zm00001e011398	subunit gamma of cargo adaptor F-subcomplex	0.07	OrthoFinder output from all 47 species
Zm00001e033065_P001	Zm00001e033065	subunit gamma of cargo adaptor F-subcomplex	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005798	Golgi-associated vesicle	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	HCCA
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	30	541

External Links

No external refs found!

AMTR_s00059p00069290 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation