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  5. AMTR_s00059p00054360

AMTR_s00059p00054360 (SDH1-1,...)


Aliases : SDH1-1, evm_27.TU.AmTr_v1.0_scaffold00059.34

Description : Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.SDH1-type flavoprotein component


Gene families : OG0003596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003596_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00059p00054360

Target Alias Description ECC score Gene Family Method Actions
Adi_g000010 SDH1-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10272 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.28G019200.1 SDH1-1, Ceric.28G019200 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01018976001 SDH1-1 Cellular respiration.tricarboxylic acid cycle.succinate... 0.03 OrthoFinder output from all 47 species
LOC_Os07g04240.1 SDH1-1, LOC_Os07g04240 flavoprotein component SDH1 of succinate dehydrogenase complex 0.06 OrthoFinder output from all 47 species
MA_119336g0010 SDH1-1 flavoprotein component SDH1 of succinate dehydrogenase complex 0.02 OrthoFinder output from all 47 species
Spa_g09084 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR003953 FAD-binding_2 48 444
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C 499 631
No external refs found!