AMTR_s00058p00222150 (NF-YB10,...)

Aliases : NF-YB10, evm_27.TU.AmTr_v1.0_scaffold00058.243

Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YB component

Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00058p00222150

Target	Alias	Description	ECC score	Gene Family Method
Adi_g117197	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Als_g34439	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Als_g47251	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Dde_g13544	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Msp_g00323	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.04	OrthoFinder output from all 47 species
Nbi_g01778	NF-YB3	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Sam_g30237	No alias	component *(NF-YB) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003958	CBFA_NFYB_domain	30	94

External Links

No external refs found!