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  5. AMTR_s00058p00193720

AMTR_s00058p00193720 (LSF1,...)


Aliases : LSF1, evm_27.TU.AmTr_v1.0_scaffold00058.193

Description : Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.LSF phosphoglucan phosphatase


Gene families : OG0007733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00193720

Target Alias Description ECC score Gene Family Method Actions
Cba_g08404 LSF1 alpha-amylase-binding scaffold protein *(LSF1) &... 0.02 OrthoFinder output from all 47 species
Ceric.37G061000.1 LSF1, Ceric.37G061000 alpha-amylase-binding scaffold protein *(LSF1) &... 0.05 OrthoFinder output from all 47 species
Dcu_g13526 LSF1 alpha-amylase-binding scaffold protein *(LSF1) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012487 LSF1 alpha-amylase-binding scaffold protein *(LSF1) &... 0.03 OrthoFinder output from all 47 species
Sam_g19343 No alias alpha-amylase-binding scaffold protein *(LSF1) &... 0.03 OrthoFinder output from all 47 species
Solyc12g062250.2.1 LSF1, Solyc12g062250 phosphoglucan phosphatase (LSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006470 protein dephosphorylation IEA Interproscan
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000340 Dual-sp_phosphatase_cat-dom 313 438
No external refs found!