Sequence Description Alias PCC hrr AMTR_s00002p00254720 Solute transport.channels.CorA family.MRS/MGT metal cation transporter MGT10, GMN10, MRS2-11, ATMGT10, evm_27.TU.AmTr_v1.0_scaffold00002.387 0.9517304922772974 1 AMTR_s00068p00029180 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase PDE181, ZDS, SPC1, evm_27.TU.AmTr_v1.0_scaffold00068.6 0.9482987707526758 2 AMTR_s00038p00141420 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic glucanotransferase DPE2, evm_27.TU.AmTr_v1.0_scaffold00038.86 0.9394108204278008 3 AMTR_s00122p00077720 Photosynthesis.photorespiration.glycerate kinase evm_27.TU.AmTr_v1.0_scaffold00122.28 0.9364142694617635 4 AMTR_s00047p00095590 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD1, evm_27.TU.AmTr_v1.0_scaffold00047.38 0.9336850302995897 5 AMTR_s00016p00219550 evm_27.TU.AmTr_v1.0_scaffold00016.199 0.9320340467420154 6 AMTR_s00049p00119540 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin ATF1, TRXF1, evm_27.TU.AmTr_v1.0_scaffold00049.94 0.9245619353158394 7 AMTR_s00340p00004320 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.mCSF splicing factor evm_27.TU.AmTr_v1.0_scaffold00340.1 0.9235670970851847 8 AMTR_s00047p00218860 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.FLN2 regulatory factor FLN2, evm_27.TU.AmTr_v1.0_scaffold00047.167 0.9234472693325622 16 AMTR_s00042p00221280 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP97B3, evm_27.TU.AmTr_v1.0_scaffold00042.72 0.9188339950249744 23 AMTR_s00078p00073300 evm_27.TU.AmTr_v1.0_scaffold00078.44 0.9181533291143261 11 AMTR_s00021p00151130 evm_27.TU.AmTr_v1.0_scaffold00021.107 0.9179687490489752 13 AMTR_s00029p00240470 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana WEB1, evm_27.TU.AmTr_v1.0_scaffold00029.410 0.9147241517225648 21 AMTR_s00057p00165960 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase PCB2, evm_27.TU.AmTr_v1.0_scaffold00057.167 0.9140373211217729 14 AMTR_s00044p00143330 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3, evm_27.TU.AmTr_v1.0_scaffold00044.141 0.9128192777958528 30 AMTR_s00112p00086310 evm_27.TU.AmTr_v1.0_scaffold00112.21 0.9088815062580969 36 AMTR_s00071p00074520 PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.45 0.9078269942444125 17 AMTR_s00007p00247090 evm_27.TU.AmTr_v1.0_scaffold00007.270 0.9076200019776751 18 AMTR_s00010p00206450 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.monomeric acetyl-CoA carboxylase EMB22, GK, AT-ACC1, ACC1, PAS3, evm_27.TU.AmTr_v1.0_scaffold00010.198 0.9074514682082961 19 AMTR_s00040p00143220 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) evm_27.TU.AmTr_v1.0_scaffold00040.110 0.9041300641798421 20 AMTR_s00040p00188540 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme SBE2.2, evm_27.TU.AmTr_v1.0_scaffold00040.184 0.9035920842358662 21 AMTR_s00017p00253090 Protein modification.acetylation.sirtuin-type lysine deacetylase SRT2, AtSRT2, evm_27.TU.AmTr_v1.0_scaffold00017.263 0.9023319627652706 22 AMTR_s00069p00176780 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen CYP704A2, evm_27.TU.AmTr_v1.0_scaffold00069.157 0.9018548995669383 23 AMTR_s00106p00046740 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase EMB2369, evm_27.TU.AmTr_v1.0_scaffold00106.25 0.9016397127872827 50 AMTR_s00048p00222810 evm_27.TU.AmTr_v1.0_scaffold00048.208 0.899686511136143 25 AMTR_s00112p00137130 Solute transport.carrier-mediated transport.MFS superfamily.SP family.hexose transporter (SGB/GlcT-type) evm_27.TU.AmTr_v1.0_scaffold00112.35 0.8988926545174941 26 AMTR_s00071p00199450 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter evm_27.TU.AmTr_v1.0_scaffold00071.217 0.8985600230669001 74 AMTR_s00066p00130420 Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.123 0.8962419612879665 28 AMTR_s00061p00166800 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.RecX RecA-activity modulator evm_27.TU.AmTr_v1.0_scaffold00061.170 0.8958353884760192 29 AMTR_s00066p00198600 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1, evm_27.TU.AmTr_v1.0_scaffold00066.264 0.895615062374636 64 AMTR_s00171p00047960 evm_27.TU.AmTr_v1.0_scaffold00171.29 0.894421081854765 31 AMTR_s00002p00210720 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL19 component evm_27.TU.AmTr_v1.0_scaffold00002.217 0.893929155758336 63 AMTR_s00099p00089660 evm_27.TU.AmTr_v1.0_scaffold00099.67 0.8938537273411524 35 AMTR_s00006p00243670 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00006.123 0.8933365376505139 34 AMTR_s00011p00266100 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor SIGB, SIG2, SIGA, SIG1, RPOD1, evm_27.TU.AmTr_v1.0_scaffold00011.228 0.8930876377280065 68 AMTR_s00046p00227230 Uncharacterized protein At4g37920 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.167 0.8926202180118932 36 AMTR_s00007p00219480 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2, evm_27.TU.AmTr_v1.0_scaffold00007.207 0.8925027760618165 67 AMTR_s00036p00206170 evm_27.TU.AmTr_v1.0_scaffold00036.123 0.8923190865648608 59 AMTR_s00061p00120110 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase ADG1, APS1, evm_27.TU.AmTr_v1.0_scaffold00061.96 0.8920249150784979 48 AMTR_s00092p00149880 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.118 0.8918920399002555 40 AMTR_s00092p00157010 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.132 0.8917106669996097 41 AMTR_s00130p00051210 evm_27.TU.AmTr_v1.0_scaffold00130.20 0.8913516936947085 42 AMTR_s00059p00156080 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component evm_27.TU.AmTr_v1.0_scaffold00059.142 0.891250882591914 68 AMTR_s00019p00236430 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.NFU1/2/3 component ATCNFU3, NFU3, evm_27.TU.AmTr_v1.0_scaffold00019.332 0.8902176309730454 45 AMTR_s00153p00036670 Lipid metabolism.galactolipid and sulfolipid synthesis.plastidial UDP-glucose pyrophosphorylase UGP3, evm_27.TU.AmTr_v1.0_scaffold00153.14 0.889146919526275 47 AMTR_s00109p00098140 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) evm_27.TU.AmTr_v1.0_scaffold00109.86 0.8891158229898009 48 AMTR_s00001p00253330 evm_27.TU.AmTr_v1.0_scaffold00001.328 0.8885640582094306 93 AMTR_s00078p00105470 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase AMY3, ATAMY3, evm_27.TU.AmTr_v1.0_scaffold00078.76 0.8882304670270195 50 AMTR_s00003p00268300 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.397 0.8876211341374735 73 AMTR_s00103p00070570 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor AtcpRRF, HFP108, cpRRF, RRF, evm_27.TU.AmTr_v1.0_scaffold00103.36 0.8872654065407286 52 AMTR_s00029p00219050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH7/9 component ftsh9, evm_27.TU.AmTr_v1.0_scaffold00029.331 0.8870525958513452 54 AMTR_s00025p00248100 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana FZL, evm_27.TU.AmTr_v1.0_scaffold00025.402 0.8858481275056399 55 AMTR_s00048p00030920 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF2 assembly factor evm_27.TU.AmTr_v1.0_scaffold00048.6 0.8857935289437227 56 AMTR_s00019p00208640 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.251 0.8853816938283205 58 AMTR_s00110p00094310 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00110.55 0.8847339877530608 86 AMTR_s00046p00214930 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana CRR22, evm_27.TU.AmTr_v1.0_scaffold00046.141 0.884483192998634 71 AMTR_s00005p00062400 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.PRDA1 FSD2-interacting factor evm_27.TU.AmTr_v1.0_scaffold00005.9 0.8843620125474062 62 AMTR_s00065p00022170 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) PDE319, SCA3, evm_27.TU.AmTr_v1.0_scaffold00065.7 0.8840819974566553 91 AMTR_s00077p00168500 evm_27.TU.AmTr_v1.0_scaffold00077.183 0.8834819686822054 64 AMTR_s00045p00200960 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein LPA1, evm_27.TU.AmTr_v1.0_scaffold00045.260 0.8828810839561134 66 AMTR_s00010p00256310 evm_27.TU.AmTr_v1.0_scaffold00010.391 0.882770262047471 67 AMTR_s00011p00266820 Cell wall.pectin.modification and degradation.pectin acetylesterase evm_27.TU.AmTr_v1.0_scaffold00011.233 0.8824169326680116 68 AMTR_s00083p00031040 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase GGAT1, GGT1, AOAT1, evm_27.TU.AmTr_v1.0_scaffold00083.7 0.8819986855953743 69 AMTR_s00001p00173820 Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.164 0.8819638625415576 91 AMTR_s00109p00097700 Malonate--CoA ligase OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.85 0.8819200037784904 71 AMTR_s00036p00115830 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor AT-HSFA6B, HSFA6B, evm_27.TU.AmTr_v1.0_scaffold00036.48 0.8812866418200728 72 AMTR_s00078p00035540 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) APX6, evm_27.TU.AmTr_v1.0_scaffold00078.14 0.880620868441752 73 AMTR_s00117p00058770 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.VDE violaxanthin de-epoxidase NPQ1, AVDE1, evm_27.TU.AmTr_v1.0_scaffold00117.15 0.8802551298924213 74 AMTR_s00002p00197820 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.183 0.8799922610841958 75 AMTR_s00016p00187060 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase ATSKL1, SKL1, evm_27.TU.AmTr_v1.0_scaffold00016.149 0.8793168216742109 76 AMTR_s00025p00170170 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.202 0.8792329127379541 77 AMTR_s00085p00110520 evm_27.TU.AmTr_v1.0_scaffold00085.68 0.8789736455653036 78 AMTR_s00175p00057810 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase CSB3, CLB4, GCPE, HDS, ISPG, evm_27.TU.AmTr_v1.0_scaffold00175.30 0.8780130878556186 80 AMTR_s00101p00041820 evm_27.TU.AmTr_v1.0_scaffold00101.13 0.8777866354437395 82 AMTR_s00099p00159350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyll dephytylase (CLD) evm_27.TU.AmTr_v1.0_scaffold00099.158 0.8775073833147813 83 AMTR_s00117p00114400 Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana AAE15, evm_27.TU.AmTr_v1.0_scaffold00117.48 0.8767701466611191 84 AMTR_s00008p00166810 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme ATISA3, ISA3, evm_27.TU.AmTr_v1.0_scaffold00008.90 0.8754434893610679 98 AMTR_s00004p00065250 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein ZKT, evm_27.TU.AmTr_v1.0_scaffold00004.48 0.8752894672782692 92 AMTR_s00101p00064110 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose synthase SQD1, evm_27.TU.AmTr_v1.0_scaffold00101.37 0.8746977805258591 98 AMTR_s00007p00258060 50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.309 0.8744498680097794 90 AMTR_s00077p00134480 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8, evm_27.TU.AmTr_v1.0_scaffold00077.129 0.8740695954868086 98 AMTR_s00009p00261490 evm_27.TU.AmTr_v1.0_scaffold00009.333 0.8738482285569509 94 AMTR_s00019p00233430 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.homogentisate phytyltransferase (VTE2/HPT) HPT1, ATHPT, TPT1, VTE2, evm_27.TU.AmTr_v1.0_scaffold00019.323 0.8737509127917863 95 AMTR_s00007p00266080 Protein WHATS THIS FACTOR 1 OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00007.368 0.8733825776040723 96 AMTR_s00045p00149950 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00045.161 0.8731234677070294 98 AMTR_s00066p00057600 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase PGLP1, ATPGLP1, evm_27.TU.AmTr_v1.0_scaffold00066.32 0.8731060686761494 99 AMTR_s00101p00054450 evm_27.TU.AmTr_v1.0_scaffold00101.26 0.8723720350470509 100