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  5. AMTR_s00057p00204520

AMTR_s00057p00204520 (IDD2, AtIDD2,...)


Aliases : IDD2, AtIDD2, evm_27.TU.AmTr_v1.0_scaffold00057.241

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00204520

Target Alias Description ECC score Gene Family Method Actions
AT5G03150 JKD C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
AT5G66730 No alias C2H2-like zinc finger protein 0.03 OrthoFinder output from all 47 species
Adi_g012802 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g012803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020457 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g068284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069013 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g080135 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g099246 NUC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17401 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g21518 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21463.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31986.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69376.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G010300.1 IDD16, AtIDD16,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G030700.1 MGP, Ceric.17G030700 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17431 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_03909 AtIDD7, IDD7 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_17209 IDD16, AtIDD16 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g14010.1 MGP, LOC_Os01g14010 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g51590.1 LOC_Os01g51590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g13400.1 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_10430137g0020 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Pir_g27424 JKD C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g30264 JKD C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g38471 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g61845 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g09226 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc03g098070.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g062670.3.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc06g072360.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc09g065670.3.1 MGP, Solyc09g065670 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e003968_P002 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e004751_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e016559_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!