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  5. AMTR_s00057p00202310

AMTR_s00057p00202310 (NF-YB5,...)


Aliases : NF-YB5, evm_27.TU.AmTr_v1.0_scaffold00057.235

Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YB component


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00202310
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00239530 NF-YB3,... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00129310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
AT1G21970 EMB212, NF-YB9,... Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.04 OrthoFinder output from all 47 species
AT5G47670 NF-YB6, L1L nuclear factor Y, subunit B6 0.05 OrthoFinder output from all 47 species
Adi_g014460 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ala_g15546 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Als_g07575 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.04 OrthoFinder output from all 47 species
Als_g19135 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.01 OrthoFinder output from all 47 species
Als_g47251 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aop_g04354 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.01 OrthoFinder output from all 47 species
Aspi01Gene09220.t1 NF-YB3, Aspi01Gene09220 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16041.t1 NF-YB6, L1L,... transcription factor *(LEC) involved in seed maturation... 0.08 OrthoFinder output from all 47 species
Aspi01Gene41539.t1 NF-YB3, Aspi01Gene41539 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64387.t1 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.04 OrthoFinder output from all 47 species
Azfi_s1600.g104553 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.03 OrthoFinder output from all 47 species
Ceric.18G000500.1 NF-YB3, Ceric.18G000500 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Dcu_g42940 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01010264001 NF-YB5 RNA biosynthesis.transcriptional activation.NF-Y... 0.05 OrthoFinder output from all 47 species
GSVIVT01014689001 NF-YB6, L1L RNA biosynthesis.transcriptional activation.NF-Y... 0.06 OrthoFinder output from all 47 species
GSVIVT01022214001 NF-YB3 RNA biosynthesis.transcriptional activation.NF-Y... 0.04 OrthoFinder output from all 47 species
Gb_00064 NF-YB6, L1L component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Gb_24990 NF-YB6, L1L component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g70880.1 NF-YB5, LOC_Os01g70880 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g49410.1 EMB212, NF-YB9,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g41580.1 NF-YB3, LOC_Os07g41580 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Len_g20303 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Lfl_g01336 EMB212, NF-YB9,... transcription factor *(LEC) involved in seed maturation... 0.02 OrthoFinder output from all 47 species
Mp4g13360.1 NF-YB3 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Msp_g09416 NF-YB2 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Nbi_g08903 NF-YB8 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pir_g13890 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Pir_g41507 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pnu_g03024 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pnu_g04888 NF-YB6, L1L not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10547 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Ppi_g01827 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Solyc01g099320.4.1 NF-YB5, Solyc01g099320 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Solyc06g009010.1.1 NF-YB5, Solyc06g009010 component NF-YB of NF-Y transcription factor complex 0.07 OrthoFinder output from all 47 species
Solyc09g074760.1.1 NF-YB5, Solyc09g074760 component NF-YB of NF-Y transcription factor complex 0.07 OrthoFinder output from all 47 species
Solyc12g027650.1.1 NF-YB7, Solyc12g027650 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e010728_P001 NF-YB3, Zm00001e010728 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e015699_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Zm00001e015700_P001 NF-YB6, L1L,... component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e021676_P001 NF-YB3, Zm00001e021676 component NF-YB of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e035517_P001 NF-YB3, Zm00001e035517 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Zm00001e036848_P001 EMB212, NF-YB9,... component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 49 113
No external refs found!