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  5. AMTR_s00057p00149330

AMTR_s00057p00149330 (VAP27-2,...)


Aliases : VAP27-2, evm_27.TU.AmTr_v1.0_scaffold00057.135

Description : Vesicle-associated protein 1-3 OS=Arabidopsis thaliana


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00149330

Target Alias Description ECC score Gene Family Method Actions
Adi_g102804 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01001317001 PVA12 Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g71050.1 VAP27-2, LOC_Os01g71050 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc08g007200.4.1 Solyc08g007200 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Zm00001e018705_P003 VAP27-2, Zm00001e018705 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 8 96
No external refs found!