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  5. AMTR_s00057p00082330

AMTR_s00057p00082330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.52

No description available


Gene families : OG0008438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00082330
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00210960 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00099370 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT4G02170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT4G29110 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT4G32860 No alias unknown protein; Has 46 Blast hits to 46 proteins in 10... 0.01 OrthoFinder output from all 47 species
AT5G38700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Gb_14247 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_14965 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_49467g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7981g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g21290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g079660.2.1 Solyc01g079660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g008380.1.1 Solyc12g008380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR008480 DUF761_pln 128 161
No external refs found!