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  5. AMTR_s00056p00211180

AMTR_s00056p00211180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.202

No description available


Gene families : OG0002335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00211180

Target Alias Description ECC score Gene Family Method Actions
Adi_g083260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021244 No alias not classified & original description: CDS=1-804 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 89 152
IPR000504 RRM_dom 260 318
No external refs found!