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  5. AMTR_s00056p00204920

AMTR_s00056p00204920 (MYB36, AtMYB36,...)


Aliases : MYB36, AtMYB36, evm_27.TU.AmTr_v1.0_scaffold00056.195

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00204920
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 OrthoFinder output from all 47 species
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.04 OrthoFinder output from all 47 species
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 OrthoFinder output from all 47 species
Aev_g41043 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ala_g20862 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g40583 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54012.t1 MYB86, ATMYB86,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57724.t1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g04249 MYB7, ATY49, ATMYB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024036001 MYB32, AtMYB32 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01030866001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01035041001 PFG3, ATMYB111, MYB111 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02250.1 AtMYB93, MYB93,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37970.1 AtMYB93, MYB93,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43550.1 MYB7, ATY49,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g58292 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
MA_130918g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_175772g0010 MYB3, ATMYB3 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_223201g0010 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Nbi_g10046 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pir_g15609 ATMYB46, MYB46 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42881 MYB36, AtMYB36 MYB class-R2R3 subgroup-14 transcription factor &... 0.03 OrthoFinder output from all 47 species
Solyc02g087960.3.1 ATMYB94,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc06g071690.3.1 MYB86, ATMYB86,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc10g005550.3.1 MYB58, ATMYB58,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Tin_g15617 MYB60, AtMYB60 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010251_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 62
IPR001005 SANT/Myb 69 111
No external refs found!