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  5. AMTR_s00056p00189660

AMTR_s00056p00189660 (SNF7.1,...)


Aliases : SNF7.1, evm_27.TU.AmTr_v1.0_scaffold00056.174

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00056p00189660

Target Alias Description ECC score Gene Family Method Actions
Cre06.g282200 SNF7.2, VPS32 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007126 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024369 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 20 115
No external refs found!