1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00056p00092670

AMTR_s00056p00092670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.67

No description available


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00092670
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT1G54095 No alias Protein of unknown function (DUF1677) 0.01 OrthoFinder output from all 47 species
AT5G20670 No alias Protein of unknown function (DUF1677) 0.02 OrthoFinder output from all 47 species
AT5G25840 No alias Protein of unknown function (DUF1677) 0.02 OrthoFinder output from all 47 species
Ala_g23120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26315.t1 Aspi01Gene26315 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26438.t1 Aspi01Gene26438 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene61908.t1 Aspi01Gene61908 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G040700.1 Ceric.03G040700 not classified & original description: pacid=50571909... 0.02 OrthoFinder output from all 47 species
Ceric.13G005200.1 Ceric.13G005200 not classified & original description: pacid=50635812... 0.02 OrthoFinder output from all 47 species
Dac_g22156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g00306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017006001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01017007001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_05142 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g54170.1 LOC_Os01g54170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g46300.1 LOC_Os03g46300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g11300.1 LOC_Os05g11300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g36040.1 LOC_Os06g36040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g01634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10642 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10279500g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_140731g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9276027g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g23392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g120920.1.1 Solyc03g120920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g054130.1.1 Solyc06g054130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g066530.1.1 Solyc06g066530 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g082190.1.1 Solyc09g082190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g49689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005661_P001 Zm00001e005661 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012047_P001 Zm00001e012047 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e016513_P001 Zm00001e016513 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030672_P001 Zm00001e030672 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 83 184
No external refs found!