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  5. AMTR_s00056p00032600

AMTR_s00056p00032600 (ATCCD1, CCD1, NCED1,...)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1, evm_27.TU.AmTr_v1.0_scaffold00056.18

Description : Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus sativus


Gene families : OG0003176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003176_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00032600
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Adi_g069290 CCD4, NCED4 zaxinone synthase *(ZAS) & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g079827 No alias zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079828 ATCCD1, CCD1,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g085647 No alias zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23100 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33049 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16482.t1 Aspi01Gene16482 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40898 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12591 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31710 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035636001 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
LOC_Os08g28240.1 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.02 OrthoFinder output from all 47 species
LOC_Os09g15240.1 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.08 OrthoFinder output from all 47 species
Len_g50459 CCD4, NCED4 zaxinone synthase *(ZAS) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16428 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23531 No alias zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25305 No alias zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35548 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033803_P002 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.05 OrthoFinder output from all 47 species
Zm00001e036424_P001 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 29 391
No external refs found!