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  5. AMTR_s00055p00205520

AMTR_s00055p00205520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.144

No description available


Gene families : OG0002636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00205520

Target Alias Description ECC score Gene Family Method Actions
AT1G19020 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51004.t1 Aspi01Gene51004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44686 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os02g50710.1 LOC_Os02g50710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g37810.1 LOC_Os03g37810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g13190.1 LOC_Os06g13190 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10434785g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g12920.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g18678 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c15_120V3.1 Pp3c15_120 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g06633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g080600.1.1 Solyc02g080600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g006390.1.1 Solyc05g006390 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e015779_P001 Zm00001e015779 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e036058_P001 Zm00001e036058 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!