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  5. AMTR_s00055p00201730

AMTR_s00055p00201730 (MMP,...)


Aliases : MMP, evm_27.TU.AmTr_v1.0_scaffold00055.140

Description : Protein degradation.peptidase families.metallopeptidase activities.Matrixin-type metalloprotease


Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00201730

Target Alias Description ECC score Gene Family Method Actions
AT1G24140 No alias Matrixin family protein 0.08 OrthoFinder output from all 47 species
AT1G59970 No alias Matrixin family protein 0.02 OrthoFinder output from all 47 species
AT1G70170 MMP matrix metalloproteinase 0.02 OrthoFinder output from all 47 species
AT4G16640 No alias Matrixin family protein 0.04 OrthoFinder output from all 47 species
Adi_g060237 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ala_g32271 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aop_g03130 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dac_g11955 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ehy_g30544 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
GSVIVT01018206001 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
GSVIVT01020151001 MMP Protein degradation.peptidase families.metallopeptidase... 0.14 OrthoFinder output from all 47 species
GSVIVT01032545001 MMP Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Gb_17716 No alias Matrixin-type metalloprotease 0.04 OrthoFinder output from all 47 species
Gb_39954 MMP Matrixin-type metalloprotease 0.04 OrthoFinder output from all 47 species
Gb_39955 MMP Matrixin-type metalloprotease 0.04 OrthoFinder output from all 47 species
LOC_Os02g50730.1 MMP, LOC_Os02g50730 Matrixin-type metalloprotease 0.06 OrthoFinder output from all 47 species
LOC_Os06g13180.1 MMP, LOC_Os06g13180 Matrixin-type metalloprotease 0.09 OrthoFinder output from all 47 species
MA_10426152g0010 No alias Matrixin-type metalloprotease 0.09 OrthoFinder output from all 47 species
Pir_g41391 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Solyc04g005040.1.1 Solyc04g005040 Matrixin-type metalloprotease 0.13 OrthoFinder output from all 47 species
Solyc04g005050.1.1 Solyc04g005050 Matrixin-type metalloprotease 0.13 OrthoFinder output from all 47 species
Tin_g08223 MMP EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Zm00001e015780_P001 MMP, Zm00001e015780 Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
Zm00001e036059_P001 MMP, Zm00001e036059 Matrixin-type metalloprotease 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 151 304
IPR002477 Peptidoglycan-bd-like 54 109
No external refs found!