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  5. AMTR_s00055p00193060

AMTR_s00055p00193060 (FIM5, FIM2,...)


Aliases : FIM5, FIM2, evm_27.TU.AmTr_v1.0_scaffold00055.128

Description : Cytoskeleton.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor


Gene families : OG0001639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00193060

Target Alias Description ECC score Gene Family Method Actions
Aop_g12614 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000881.32 No alias Cytoskeleton.microfilament network.actin... 0.01 OrthoFinder output from all 47 species
LOC_Os02g37580.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
Ore_g04544 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005638 FIM1, ATFIM1 fimbrin actin-crosslinking factor & original... 0.02 OrthoFinder output from all 47 species
Solyc06g083070.3.1 Solyc06g083070 fimbrin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
Solyc07g049600.4.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
Solyc07g065080.4.1 FIM1, ATFIM1,... fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e014968_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 148 237
IPR001715 CH_dom 395 496
IPR001715 CH_dom 270 368
IPR001715 CH_dom 518 619
No external refs found!