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  5. AMTR_s00055p00070380

AMTR_s00055p00070380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.27

Description : Nitrate regulatory gene2 protein OS=Arabidopsis thaliana


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00070380
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Adi_g071250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38522.t1 Aspi01Gene38522 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G008500.1 Ceric.37G008500 not classified & original description: pacid=50616831... 0.03 OrthoFinder output from all 47 species
Dac_g21966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01006889001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01021596001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g43770.1 LOC_Os02g43770 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g11070.1 LOC_Os07g11070 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g41310.1 LOC_Os10g41310 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g05030.1 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g10713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g34525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g068100.3.1 Solyc08g068100 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g12290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015309_P001 Zm00001e015309 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006868 DUF630 1 63
IPR006867 DUF632 221 533
No external refs found!