AMTR_s00054p00133410 (BGAL10,...)

Aliases : BGAL10, evm_27.TU.AmTr_v1.0_scaffold00054.42

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase

Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00054p00133410

Target	Alias	Description	ECC score	Gene Family Method
AT1G45130	BGAL5	beta-galactosidase 5	0.02	OrthoFinder output from all 47 species
Cba_g78096	BGAL1	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g17467	BGAL8	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g24827	BGAL8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01005849001	BGAL8	Beta-galactosidase 6 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
GSVIVT01006709001	BGAL8	Cell wall.pectin.rhamnogalacturonan I.modification and...	0.04	OrthoFinder output from all 47 species
GSVIVT01033736001	BGAL7	Cell wall.pectin.rhamnogalacturonan I.modification and...	0.14	OrthoFinder output from all 47 species
Solyc11g069270.2.1	BGAL8, Solyc11g069270	beta-galactosidase (BGAL)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0030246	carbohydrate binding	IEA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001944	Glycoside_Hdrlase_35	35	340
IPR000922	Lectin_gal-bd_dom	774	851

External Links

No external refs found!