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  5. AMTR_s00054p00091550

AMTR_s00054p00091550 (PHYE,...)


Aliases : PHYE, evm_27.TU.AmTr_v1.0_scaffold00054.30

Description : Phytochrome OS=Pinus sylvestris


Gene families : OG0000699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00054p00091550

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene07496.t1 HY3, OOP1, PHYB,... phytochrome photoreceptor *(PHY) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0094.g043421 HY3, OOP1, PHYB phytochrome photoreceptor *(PHY) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g18429 FHY2, HY8, PHYA, FRE1 temperature sensor protein *(PHY-B) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003018 GAF 59 118
No external refs found!